Checksum errors: 2 kinds

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Nefarious
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Checksum errors: 2 kinds

Post by Nefarious » Tue Oct 28, 2008 3:02 pm

Here's the log file. Note: folding did get a proper WU after a few tries. Cheers

Code: Select all

[20:48:47] Completed 245000 out of 250000 steps  (98%)
[21:19:51] Completed 247500 out of 250000 steps  (99%)
[21:50:46] Completed 250000 out of 250000 steps  (100%)
[21:51:52]
[21:51:52] Finished Work Unit:
[21:51:52] - Reading up to 24644928 from "work/wudata_08.trr": Read 24644928
[21:51:56] - Checksum of file (work/wudata_08.trr) read from disk doesn't match
[21:51:56]
[21:51:56] Folding@home Core Shutdown: FILE_IO_ERROR
[21:55:14] CoreStatus = 75 (117)
[21:55:14] Error opening or reading from a file.
[21:55:14] Deleting current work unit & continuing...
[21:55:38] - Preparing to get new work unit...
[21:55:38] + Attempting to get work packet
[21:55:38] - Connecting to assignment server
[21:55:39] - Successful: assigned to (171.64.65.63).
[21:55:39] + News From Folding@Home: Welcome to Folding@Home
[21:55:39] Loaded queue successfully.
[21:55:42] + Closed connections
[21:55:47]
[21:55:47] + Processing work unit
[21:55:47] Core required: FahCore_a1.exe
[21:55:47] Core found.
[21:55:47] Working on queue slot 09 [October 27 21:55:47 UTC]
[21:55:47] + Working ...
[21:55:47]
[21:55:47] *------------------------------*
[21:55:47] Folding@Home Gromacs SMP Core
[21:55:47] Version 1.74 (September 24, 2007)
[21:55:47]
[21:55:47] Preparing to commence simulation
[21:55:47] - Ensuring status. Please wait.
[21:55:47] Created dyn
[21:55:47] - Files status OK
[21:55:48] - Expanded 609849 -> 3263429 (decompressed 535.1 percent)
[21:55:48] - Starting from initial work packet
[21:55:48]
[21:55:48] Project: 3064 (Run 2, Clone 112, Gen 20)
[21:55:48]
[21:55:48] Assembly optimizations on if available.
[21:55:48] Entering M.D.
[21:56:05]  percent)
[21:56:05] - Starting from initial work packet
[21:56:05]
[21:56:05] Project: 3064 (Run 2, Clone 112, Gen 20)
[21:56:05]
[21:56:05] Entering M.D.
[21:56:11]  checkpoint
[21:56:11] ilename:
[21:56:11] 3064_lambda5_2003
[21:56:11] Writing local files
[21:56:11] cal files
[21:56:12] Extra SSE Writing local files
[21:56:12] Completed 0 out of 5000000 steps  (0 percent)
[22:12:27] Size of work/wudata_09.xtc not what saved.
[22:12:27]
[22:12:27] Folding@home Core Shutdown: FILE_IO_ERROR
[22:12:31] CoreStatus = 75 (117)
[22:12:31] Error opening or reading from a file.
[22:12:31] Deleting current work unit & continuing...
[22:16:41] - Preparing to get new work unit...
[22:16:41] + Attempting to get work packet
[22:16:41] - Connecting to assignment server
[22:16:42] - Successful: assigned to (171.64.65.63).
[22:16:42] + News From Folding@Home: Welcome to Folding@Home
[22:16:42] Loaded queue successfully.
[22:16:46] + Closed connections
[22:16:51]
[22:16:51] + Processing work unit
[22:16:51] Core required: FahCore_a1.exe
[22:16:51] Core found.
[22:16:51] Working on queue slot 00 [October 27 22:16:51 UTC]
[22:16:51] + Working ...
[22:16:52]
[22:16:52] *------------------------------*
[22:16:52] Folding@Home Gromacs SMP Core
[22:16:52] Version 1.74 (September 24, 2007)
[22:16:52]
[22:16:52] Preparing to commence simulation
[22:16:52] - Ensuring status. Please wait.
[22:16:52] Created dyn
[22:16:52] - Files status OK
[22:16:52] - Expanded 609849 -> 3263429 (decompressed 535.1 percent)
[22:16:52] - Starting from initial work packet
[22:16:52]
[22:16:52] Project: 3064 (Run 2, Clone 112, Gen 20)
[22:16:52]
[22:16:52] Assembly optimizations on if available.
[22:16:52] Entering M.D.
[22:17:09]  percent)
[22:17:09] - Starting from initial work packet
[22:17:09]
[22:17:09] Project: 3064 (Run 2, Clone 112, Gen 20)
[22:17:09]
[22:17:09] Entering M.D.
[22:17:15] mdrunner cpfilename:
[22:17:15] Rejecting checkpoint
[22:17:16] a SSE boost OK.
[22:17:16] ocal files
[22:17:16] Extra SSE boost OK.
[22:17:16]
[22:17:16] Extra SSE boost OK.
[22:17:16] Writing local files
[22:17:16] Completed 0 out of 5000000 steps  (0 percent)
[22:33:30] - Checksums don't match (work/wudata_00.xtc)
[22:33:31] Premature end of file when checksumming (4840 bytes left)
[22:33:31] - Could not calculate checksum (work/wudata_00.xtc)
[22:33:32] Checksum not what expected.
[22:33:33]
[22:33:33] Folding@home Core Shutdown: FILE_IO_ERROR
[22:33:37] CoreStatus = 75 (117)
[22:33:37] Error opening or reading from a file.
[22:33:37] Deleting current work unit & continuing...
54] *------------------------------*
[21:57:54] Folding@Home Gromacs SMP Core
[21:57:54] Version 1.74 (September 24, 2007)
[21:57:54]
[21:57:54] Preparing to commence simulation
[21:57:54] - Ensuring status. Please wait.
[21:58:11] - Looking at optimizations...
[21:58:11] - Working with standard loops on this execution.
[21:58:11] - Previous termination of core was improper.
[21:58:11] - Going to use standard loops.
[21:58:11] - Files status OK
[21:58:12] - Expanded 609849 -> 3263429 (decompressed 535.1 percent)
[21:58:12]
[21:58:12] Project: 3064 (Run 2, Clone 112, Gen 20)
[21:58:12]
[21:58:12] Entering M.D.
[21:58:18] mdrunner cpfilename:
[21:58:18] Calling FAH init
[21:58:18] Read topology
[21:58:18] (Starting from checkpoint)
[21:58:19] boost OK.
[21:58:19] point
[21:58:19] Protein: p3064_lambda5_2003
[21:58:19] Writing local files
[21:58:19] Extra SSE boost OK.
[21:58:19] Writing local files
[21:58:19] Completed 0 out of 5000000 steps  (0 percent)
[22:14:39] - Checksums don't match (work/wudata_09.xtc)
[22:14:40] Premature end of file when checksumming (9680 bytes left)
[22:14:40] - Could not calculate checksum (work/wudata_09.xtc)
[22:14:41] Checksum not what expected.
[22:14:41]
[22:14:41] Folding@home Core Shutdown: FILE_IO_ERROR
[22:14:45] CoreStatus = 75 (117)
[22:14:45] Error opening or reading from a file.
[22:14:45] Deleting current work unit & continuing...
[22:18:54] - Preparing to get new work unit...
[22:18:54] + Attempting to get work packet
[22:18:54] - Connecting to assignment server
[22:18:54] - Successful: assigned to (171.64.65.63).
[22:18:54] + News From Folding@Home: Welcome to Folding@Home
[22:18:54] Loaded queue successfully.
[22:18:55] - Attempt #1  to get work failed, and no other work to do.
Waiting before retry.
[22:19:05] + Attempting to get work packet
[22:19:05] - Connecting to assignment server
[22:19:05] - Successful: assigned to (171.64.65.63).
[22:19:05] + News From Folding@Home: Welcome to Folding@Home
[22:19:05] Loaded queue successfully.
[22:19:12] + Closed connections
[22:19:17]
[22:19:17] + Processing work unit
[22:19:17] Core required: FahCore_a1.exe
[22:19:17] Core found.
[22:19:17] Working on queue slot 00 [October 27 22:19:17 UTC]
[22:19:17] + Working ...
[22:19:17]
[22:19:17] *------------------------------*
[22:19:17] Folding@Home Gromacs SMP Core
[22:19:17] Version 1.74 (September 24, 2007)
[22:19:17]
[22:19:17] Preparing to commence simulation
[22:19:17] - Ensuring status. Please wait.
[22:19:34] - Looking at optimizations...
[22:19:34] - Working with standard loops on this execution.
[22:19:34] - Previous termination of core was improper.
[22:19:34] - Going to use standard loops.
[22:19:34] - Files status OK
[22:19:36] - Expanded 1642572 -> 9524377 (decompressed 579.8 percent)
[22:19:36] - Data doesn't match checksum.
[22:19:36] - Starting from initial work packet
[22:19:36]
[22:19:36] Project: 3065 (Run 5, Clone 85, Gen 65)
[22:19:36]
[22:19:36] Entering M.D.
[22:19:36] _00CP.arc.b
[22:19:36] - Could not calculate checksum (work/wudata_00CP.arc.b)
[22:19:36] - Could not revert
[22:19:36] - Starting from initial work packet
[22:19:36]
[22:19:36] Project: 3065 (Run 5, Clone 85, Gen 65)
[22:19:36]
[22:19:36] Entering M.D.
[22:19:43] mdrunner cpfilename:
[22:19:44] Protein: 66728 p3065_lambda5_99sb_big
[22:19:44] Writing local files
[22:19:44] Extra SSE boost OK.
[22:52:12] h (work/wudata_00.xtc)
[22:52:13] Premature end of file when checksumming (4856 bytes left)
[22:52:13] - Could not calculate checksum (work/wudata_00.xtc)
[22:52:14] Checksum not what expected.
[22:52:15]
[22:52:15] Folding@home Core Shutdown: FILE_IO_ERROR
[22:52:19] CoreStatus = 75 (117)
[22:52:19] Error opening or reading from a file.
[22:52:19] Deleting current work unit & continuing...
[22:56:28] - Preparing to get new work unit...
[22:56:28] + Attempting to get work packet
[22:56:28] - Connecting to assignment server
[22:56:29] - Successful: assigned to (171.64.65.63).
[22:56:29] + News From Folding@Home: Welcome to Folding@Home
[22:56:29] Loaded queue successfully.
[22:56:36] + Closed connections
[22:56:41]
[22:56:41] + Processing work unit
[22:56:41] Core required: FahCore_a1.exe
[22:56:41] Core found.
[22:56:41] Working on queue slot 01 [October 27 22:56:41 UTC]
[22:56:41] + Working ...
[22:56:41]
[22:56:41] *------------------------------*
[22:56:41] Folding@Home Gromacs SMP Core
[22:56:41] Version 1.74 (September 24, 2007)
[22:56:41]
[22:56:41] Preparing to commence simulation
[22:56:41] - Ensuring status. Please wait- Created dyn
[22:56:41] - Files status OK
[22:56:41]  this execution.
[22:56:41] - Created dyn
[22:56:41] - Files status OK
[22:56:42]  percent)
[22:56:42] - Starting from initial work packet
[22:56:42]
[22:56:42] Project: 3065 (Run 5, Clone 85, Gen 65)
[22:56:42]
[22:56:42] packet
[22:56:42]
[22:56:42] Project: 3065 (Run 5, Clone 85, Gen 65)
[22:56:42]
[22:56:42] M.D.
[22:56:42] ing M.D.
[22:56:59] )
[22:56:59] - Starting from initial work packet
[22:56:59]
[22:56:59] Project: 3065 (Run 5, Clone 85, Gen 65)
[22:56:59]
[22:56:59] Entering M.D.
[22:57:05] mdrunner cpfilename:
[22:57:06] sb_big
[22:57:06] Writing local files
[22:57:06] 5_99sb_big
[22:57:06] Writing local files
[22:57:06]  (0 percent)
[22:57:06] st OK.
[23:23:26]  local files
[23:23:26] Completed 25000 out of 2500000 steps  (1 percent)
[23:49:23] Writing local files
[23:49:23] Completed 50000 out of 2500000 steps  (2 percent)
[00:15:37] Writing local files
Last edited by toTOW on Tue Oct 28, 2008 6:27 pm, edited 1 time in total.
Reason: Replaced quote by code tags.
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